http://mickey.ifp.illinois.edu/speechWiki/index.php?title=GMTK_parallel_tools&feed=atom&action=history
GMTK parallel tools - Revision history
2024-03-29T10:27:42Z
Revision history for this page on the wiki
MediaWiki 1.16.5
http://mickey.ifp.illinois.edu/speechWiki/index.php?title=GMTK_parallel_tools&diff=3232&oldid=prev
Mark Hasegawa-Johnson at 14:31, 30 October 2008
2008-10-30T14:31:23Z
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>===Additional Resources===</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>===Additional Resources===</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[http://www.ifp.uiuc.edu/~bowonlee/research/cluster/HTK_parallel.htm <del class="diffchange diffchange-inline">Bowan</del>'s parallel HTK tools]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[http://www.ifp.uiuc.edu/~bowonlee/research/cluster/HTK_parallel.htm <ins class="diffchange diffchange-inline">Bowon</ins>'s parallel HTK tools]</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[http://www.ifp.uiuc.edu/~bowonlee/research/cluster/linux_cluster.htm <del class="diffchange diffchange-inline">Bowan</del>'s SGE basics]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[http://www.ifp.uiuc.edu/~bowonlee/research/cluster/linux_cluster.htm <ins class="diffchange diffchange-inline">Bowon</ins>'s SGE basics]</div></td></tr>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>--[[User:Arthur|Arthur]] 17:33, 19 September 2006 (CDT)</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>--[[User:Arthur|Arthur]] 17:33, 19 September 2006 (CDT)</div></td></tr>
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Mark Hasegawa-Johnson
http://mickey.ifp.illinois.edu/speechWiki/index.php?title=GMTK_parallel_tools&diff=2915&oldid=prev
Arthur: documented parallel gmtk scripts
2006-09-19T22:33:53Z
<p>documented parallel gmtk scripts</p>
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<td colspan='2' style="background-color: white; color:black;">Revision as of 22:33, 19 September 2006</td>
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<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">Slides are </del>[http://<del class="diffchange diffchange-inline">mickey</del>.ifp.uiuc.edu/<del class="diffchange diffchange-inline">speech</del>/<del class="diffchange diffchange-inline">akantor</del>/<del class="diffchange diffchange-inline">GMTK%20parallel%20tools</del>.<del class="diffchange diffchange-inline">ppt here</del>]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">===Scripts and Modules===</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">The *Parallel.pl scripts parse the command line args and call the routines in the corresponding *Parallel.pm modules to actually do the work.</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">* ''viterbiParallel.pl'' and ''viterbiParallel.pm'' Does a viterbi decoding in parallel and then optionally runs sclite to report recognition accuracy</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">* ''emtrainParallel.pl'' and ''emtrainParallel.pm'' Does a single iteration of EM training in parallel</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">* ''emConvergeParallel.pl'' and ''emConvergeParallel.pm'' Does a sequence of em training iterations to convergence followed by splits/vanishes of gaussians followed by more iterations to convergence according to some convergence and split/vanish schedule</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">* ''distribute.pl'' and ''distribute.pm'' Runs a list of commands in parallel on a </ins>[http://<ins class="diffchange diffchange-inline">www</ins>.ifp.uiuc.edu/<ins class="diffchange diffchange-inline">~bowonlee</ins>/<ins class="diffchange diffchange-inline">research</ins>/<ins class="diffchange diffchange-inline">cluster/linux_cluster</ins>.<ins class="diffchange diffchange-inline">htm SGE</ins>] <ins class="diffchange diffchange-inline">cluster.</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">* ''gmtkUtilParallel.pm''</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">* ''grid.pm''</ins></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">viterbiParallel</del>.<del class="diffchange diffchange-inline">pl </del>will <del class="diffchange diffchange-inline">come shortly</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">===Features===</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">* All of the code is packaged in modules: The tools can be used by calling a perl function instead of starting another script in a new process</ins>. <ins class="diffchange diffchange-inline"> </ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">* All tools are restartable. If they are interrupted for any reason (i.e. cluster glitch, or user ctrl-c's the job), rerunning the command </ins>will <ins class="diffchange diffchange-inline">only do the minimum work required to complete the job. Successfully completed sub-tasks are not rerun.</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">* A fast sanity check is performed before any parallel jobs are fired off. This way, the user gets fast feedback on simple mistakes.</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">* killing the the main script (with ctrl-c, for example) stops all execution all the compute nodes</ins></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>Additional Resources<del class="diffchange diffchange-inline">:</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">===Installation and Environment===</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">The easiest way is to have the following in your path:</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">* [http://ssli.ee.washington.edu/~bilmes/gmtk/linux/ gmtk binaries]</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">* [http://www.nist.gov/speech/tools/ sclite]</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">* SGE commands (such as qsub)</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">* These scripts themselves</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div> </div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">You must also have the *.pm modules in your path. You can do that by setting the PERL5LIB environment variable.</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div> </div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">===Documentation===</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">Not much yet. Some very rough overview slides are [http://mickey.ifp.uiuc.edu/speech/akantor/GMTK%20parallel%20tools.ppt here].</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">However the *.pm modules are relatively documented - hopefully enough to be useful.</ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">===</ins>Additional Resources<ins class="diffchange diffchange-inline">===</ins></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>[http://www.ifp.uiuc.edu/~bowonlee/research/cluster/HTK_parallel.htm Bowan's parallel HTK tools]</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>[http://www.ifp.uiuc.edu/~bowonlee/research/cluster/HTK_parallel.htm Bowan's parallel HTK tools]</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>[http://www.ifp.uiuc.edu/~bowonlee/research/cluster/linux_cluster.htm Bowan's SGE basics]</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>[http://www.ifp.uiuc.edu/~bowonlee/research/cluster/linux_cluster.htm Bowan's SGE basics]</div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;"></ins></div></td></tr>
<tr><td colspan="2"> </td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins style="color: red; font-weight: bold; text-decoration: none;">--[[User:Arthur|Arthur]] 17:33, 19 September 2006 (CDT)</ins></div></td></tr>
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Arthur
http://mickey.ifp.illinois.edu/speechWiki/index.php?title=GMTK_parallel_tools&diff=2911&oldid=prev
Xzhuang2 at 19:23, 8 September 2006
2006-09-08T19:23:38Z
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<td colspan='2' style="background-color: white; color:black;">Revision as of 19:23, 8 September 2006</td>
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<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>Slides are [http://mickey.ifp.uiuc.edu/speech/akantor/GMTK%20parallel%20tools.ppt<del class="diffchange diffchange-inline">| </del>here]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>Slides are [http://mickey.ifp.uiuc.edu/speech/akantor/GMTK%20parallel%20tools.ppt here]</div></td></tr>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>viterbiParallel.pl will come shortly</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>viterbiParallel.pl will come shortly</div></td></tr>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Additional Resources:</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Additional Resources:</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[http://www.ifp.uiuc.edu/~bowonlee/research/cluster/HTK_parallel.htm<del class="diffchange diffchange-inline">| </del>Bowan's parallel HTK tools]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[http://www.ifp.uiuc.edu/~bowonlee/research/cluster/HTK_parallel.htm Bowan's parallel HTK tools]</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>[http://www.ifp.uiuc.edu/~bowonlee/research/cluster/linux_cluster.htm<del class="diffchange diffchange-inline">| </del>Bowan's SGE basics]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[http://www.ifp.uiuc.edu/~bowonlee/research/cluster/linux_cluster.htm Bowan's SGE basics]</div></td></tr>
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Xzhuang2
http://mickey.ifp.illinois.edu/speechWiki/index.php?title=GMTK_parallel_tools&diff=2910&oldid=prev
Arthur at 21:53, 5 September 2006
2006-09-05T21:53:18Z
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<td colspan='2' style="background-color: white; color:black;">← Older revision</td>
<td colspan='2' style="background-color: white; color:black;">Revision as of 21:53, 5 September 2006</td>
</tr><tr><td colspan="2" class="diff-lineno">Line 1:</td>
<td colspan="2" class="diff-lineno">Line 1:</td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>Slides are <del class="diffchange diffchange-inline">[</del>[http://mickey.ifp.uiuc.edu/speech/akantor/GMTK%20parallel%20tools.ppt|here<del class="diffchange diffchange-inline">]</del>]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>Slides are [http://mickey.ifp.uiuc.edu/speech/akantor/GMTK%20parallel%20tools.ppt| here]</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>viterbiParallel.pl will come shortly</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>viterbiParallel.pl will come shortly</div></td></tr>
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<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Additional Resources:</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Additional Resources:</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">[</del>[http://www.ifp.uiuc.edu/~bowonlee/research/cluster/HTK_parallel.htm| Bowan's parallel HTK tools<del class="diffchange diffchange-inline">]</del>]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[http://www.ifp.uiuc.edu/~bowonlee/research/cluster/HTK_parallel.htm| Bowan's parallel HTK tools]</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">[</del>[http://www.ifp.uiuc.edu/~bowonlee/research/cluster/linux_cluster.htm| Bowan's SGE basics<del class="diffchange diffchange-inline">]</del>]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>[http://www.ifp.uiuc.edu/~bowonlee/research/cluster/linux_cluster.htm| Bowan's SGE basics]</div></td></tr>
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Arthur
http://mickey.ifp.illinois.edu/speechWiki/index.php?title=GMTK_parallel_tools&diff=2909&oldid=prev
Arthur at 21:52, 5 September 2006
2006-09-05T21:52:23Z
<p></p>
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<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>Slides are [http://mickey.ifp.uiuc.edu/speech/akantor/GMTK%20parallel%20tools.ppt|here]</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>Slides are <ins class="diffchange diffchange-inline">[</ins>[http://mickey.ifp.uiuc.edu/speech/akantor/GMTK%20parallel%20tools.ppt|here<ins class="diffchange diffchange-inline">]</ins>]</div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>viterbiParallel.pl will come shortly</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>viterbiParallel.pl will come shortly</div></td></tr>
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Arthur
http://mickey.ifp.illinois.edu/speechWiki/index.php?title=GMTK_parallel_tools&diff=2908&oldid=prev
Arthur at 21:52, 5 September 2006
2006-09-05T21:52:11Z
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<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div>Slides</div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div>Slides <ins class="diffchange diffchange-inline">are [http://mickey.ifp.uiuc.edu/speech/akantor/GMTK%20parallel%20tools.ppt|here]</ins></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'>-</td><td style="background: #ffa; color:black; font-size: smaller;"><div><del class="diffchange diffchange-inline">Tools</del></div></td><td class='diff-marker'>+</td><td style="background: #cfc; color:black; font-size: smaller;"><div><ins class="diffchange diffchange-inline">viterbiParallel.pl will come shortly</ins></div></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"></td></tr>
<tr><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Additional Resources:</div></td><td class='diff-marker'> </td><td style="background: #eee; color:black; font-size: smaller;"><div>Additional Resources:</div></td></tr>
</table>
Arthur
http://mickey.ifp.illinois.edu/speechWiki/index.php?title=GMTK_parallel_tools&diff=2907&oldid=prev
Arthur at 21:33, 5 September 2006
2006-09-05T21:33:49Z
<p></p>
<p><b>New page</b></p><div>Slides<br />
<br />
Tools<br />
<br />
Additional Resources:<br />
<br />
[[http://www.ifp.uiuc.edu/~bowonlee/research/cluster/HTK_parallel.htm| Bowan's parallel HTK tools]]<br />
<br />
[[http://www.ifp.uiuc.edu/~bowonlee/research/cluster/linux_cluster.htm| Bowan's SGE basics]]</div>
Arthur